BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002C08LP1|AL424936
(1001 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1311 1949 0.0
>3x_Contig1311
Length = 7212
Score = 1949 bits (980), Expect = 0.0
Identities = 995/1002 (99%), Gaps = 1/1002 (0%)
Strand = Plus / Plus
Query: 1 agatttcgaagaaaatggttccttggaaagaacatctcttttcttaaatttggcaaacga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4533 agatttcgaagaaaatggttccttggaaagaacatctcttttcttaaatttggcaaacga 4592
Query: 61 tccaaccattgaaagaattattactcctagattggctttgactactgctgaatatttggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4593 tccaaccattgaaagaattattactcctagattggctttgactactgctgaatatttggc 4652
Query: 121 ataccagaccgaaagacacgttttgaccattttgactgatatgtcctcttatgckgatgc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 4653 ataccagaccgaaagacacgttttgaccattttgactgatatgtcctcttatgctgatgc 4712
Query: 181 tttgagagaagtctctgctgctagagaagaagtcccaggtagacgtggttacccaggtta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4713 tttgagagaagtctctgctgctagagaagaagtcccaggtagacgtggttacccaggtta 4772
Query: 241 catgtacacagatttgtccaccatctatgaaagagctggtagagtggagggtcgtaacgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4773 catgtacacagatttgtccaccatctatgaaagagctggtagagtggagggtcgtaacgg 4832
Query: 301 ttccattacccaaattcctattttgacaatgcctaacgatgatattacacatccaattcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4833 ttccattacccaaattcctattttgacaatgcctaacgatgatattacacatccaattcc 4892
Query: 361 agatttgactggttatattacagaaggtcaaatttctgtcgatcgtcaactagataataa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4893 agatttgactggttatattacagaaggtcaaatttctgtcgatcgtcaactagataataa 4952
Query: 421 gggtatttatccaccaatcaacgttttgccttccctatcgagattaatgaagtctgckat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 4953 gggtatttatccaccaatcaacgttttgccttccctatcgagattaatgaagtctgctat 5012
Query: 481 cggtgaaggtatgacaagaaaggaccacggtgatgtttctaaccaattgtacgctaaata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5013 cggtgaaggtatgacaagaaaggaccacggtgatgtttctaaccaattgtacgctaaata 5072
Query: 541 tgccattggtagggatgctgctgccatgaaagctgtggtcggtgaggaagctttatccat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5073 tgccattggtagggatgctgctgccatgaaagctgtggtcggtgaggaagctttatccat 5132
Query: 601 tgaagataagctatctttggaatttttggaaaaattcgaaaagacctttattgctcaagg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5133 tgaagataagctatctttggaatttttggaaaaattcgaaaagacctttattgctcaagg 5192
Query: 661 tgcctatgaagacagaactgtattcgaatctttggaccaagcttggtccctttwdagaat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 5193 tgcctatgaagacagaactgtattcgaatctttggaccaagcttggtcccttttgagaat 5252
Query: 721 atatccaaaggaaatgttgaacagaatttctccaaagattttggacgaattctatgacag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5253 atatccaaaggaaatgttgaacagaatttctccaaagattttggacgaattctatgacag 5312
Query: 781 agcaagagatgaagacgaagacgaagacgacgatgatgaagaagccgtttccgctgacaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5313 agcaagagatgaagacgaagacgaagacgacgatgatgaagaagccgtttccgctgacaa 5372
Query: 841 gaaaccaaaggaatcgcagtcgttgatttgatttaggttattccgggagttactaaacta 900
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 5373 gaaaccaaaggaatcgcagtcgttgatttgatttaggttattccgggagtaactaaacta 5432
Query: 901 aataaaaattaatatcaaagtacattaaataatagttcaaaacatgatttgttttacaaa 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5433 aataaaaattaatatcaaagtacattaaataatagttcaaaacatgatttgttttacaaa 5492
Query: 961 acacgaacagtattatcaatcgccaaawtt-aactatttgta 1001
||||||||||||||||||||||||||| || |||||||||||
Sbjct: 5493 acacgaacagtattatcaatcgccaaaattaaactatttgta 5534
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8775
Number of Sequences: 1807
Number of extensions: 8775
Number of successful extensions: 111
Number of sequences better than 1.0e-20: 1
length of query: 1001
length of database: 10,358,551
effective HSP length: 16
effective length of query: 985
effective length of database: 10,329,639
effective search space: 10174694415
effective search space used: 10174694415
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)